Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P48358	ES-242-3	620.2242	621.2329	135
P48426	N-Stearoyl Aspartic acid	399.2929	400.3001	135
P51638	Dihydroisomorphine-6-glucuronide	463.1841	464.1922	135
P00007		488.7949	489.8019	134
P00391	Diethylthiophosphoric acid	170.0189	171.0268	134
P00835	Peneciraistin C	398.1573	399.1636	134
P00877	Lupinic acid	183.1238	184.1307	134
P02924		162.9316	163.9388	134
P05065	N-(35-hydroxy-pentatriacontanoyl)-sphing-4-enine	819.8070	820.8156	134
P06122		769.2075	770.2110	134

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Alias	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.16G042100		hypothetical protein	NA	78
Glyma.16G042200		hypothetical protein	AT2G23840:AT2G23840:HNH endonuclease	78
Glyma.18G262800		hypothetical protein	NA	78
Glyma.01G018000		hypothetical protein	NA	77
Glyma.04G096900		hypothetical protein	NA	77
Glyma.05G165300		hypothetical protein	AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296)	77
Glyma.05G166000		hypothetical protein	NA	77
Glyma.05G233500		hypothetical protein	NA	77
Glyma.07G096900	GmChl 2		AT1G19670:CLH1:chlorophyllase 1	77
Glyma.11G154900	PRP3		NA	77