Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54455 789.0907 790.0952 —
P54456 Darexaban glucuronide 650.2594 651.2677 —
P54462 617.4159 618.4227 —
P54463 316.8012 317.8087 —
P54465 Pentenylbenzene 146.1082 147.1157 —
P54466 (-)-4,6'-Anhydrooxysporidinone 471.3016 472.3077 —
P54467 201.1586 202.1666 —
P54468 31-Hydroxy rifabutin 862.4276 432.2210 —
P54470 Alogliptin 339.1719 340.1772 —
P54473 Tiegusanin E 650.2722 651.2779 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G042100 hypothetical protein NA 78
Glyma.16G042200 hypothetical protein AT2G23840:AT2G23840:HNH endonuclease 78
Glyma.18G262800 hypothetical protein NA 78
Glyma.01G018000 hypothetical protein NA 77
Glyma.04G096900 hypothetical protein NA 77
Glyma.05G165300 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 77
Glyma.05G166000 hypothetical protein NA 77
Glyma.05G233500 hypothetical protein NA 77
Glyma.07G096900 GmChl 2 AT1G19670:CLH1:chlorophyllase 1 77
Glyma.11G154900 PRP3 NA 77