Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P24272	Triptregeline H	611.2343	612.2392	208
P29806		116.0256	117.0329	208
P34523	Pseudouroporphyrin	786.2351	787.2411	208
P54031	Leucamide A	611.2525	612.2561	208
P20549	6,7-Dimethoxy-2-(piperazin-1-yl)quinazolin-4-amine	289.1583	290.1651	207
P25985	Rhamnazin 3-isorhamninoside	784.2535	785.2637	207
P27517		363.3063	364.3112	207
P28775	N-Acetyl-7-O-acetylneuraminate	351.1174	352.1259	207
P29805		790.1370	791.1473	207
P32329	1-Methyl-2-n-hexylbenzene	176.1546	177.1623	207

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Alias	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.16G042100		hypothetical protein	NA	78
Glyma.16G042200		hypothetical protein	AT2G23840:AT2G23840:HNH endonuclease	78
Glyma.18G262800		hypothetical protein	NA	78
Glyma.01G018000		hypothetical protein	NA	77
Glyma.04G096900		hypothetical protein	NA	77
Glyma.05G165300		hypothetical protein	AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296)	77
Glyma.05G166000		hypothetical protein	NA	77
Glyma.05G233500		hypothetical protein	NA	77
Glyma.07G096900	GmChl 2		AT1G19670:CLH1:chlorophyllase 1	77
Glyma.11G154900	PRP3		NA	77