Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55585 611.1724 612.1787 —
P55586 Cadiamine 282.1961 565.4004 —
P55587 248.9018 249.9090 —
P55589 Chromoionophore I 583.4124 584.4189 —
P55590 106.5089 107.5161 —
P55591 Gallamonum 423.3521 424.3614 —
P55592 9-Octadecenoic acid (9Z)-, (2-hydroxy-2-oxido-1,2-oxaphospholan-4-yl)methyl ester 416.2697 417.2779 —
P55593 627.2766 628.2811 —
P55596 Pyrido[2,3-d]pyrimidin-2(1H)-one, 4-cyclohexyl-1-ethyl-7-methyl- 271.1694 272.1771 —
P55599 423.3589 424.3642 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.04G110600 hypothetical protein NA 79
Glyma.04G110700 hypothetical protein AT1G72190:AT1G72190:D-isomer specific 2-hydroxyacid dehydrogenase family protein 79
Glyma.09G110000 hypothetical protein NA 79
Glyma.14G084200 hypothetical protein NA 79
Glyma.01G016500 hypothetical protein AT4G25960:ABCB2:P-glycoprotein 2 78
Glyma.03G250400 hypothetical protein AT3G04470:AT3G04470:Ankyrin repeat family protein 78
Glyma.08G110200 hypothetical protein NA 78
Glyma.15G216500 hypothetical protein NA 78
Glyma.15G220600 hypothetical protein NA 78
Glyma.15G220800 hypothetical protein NA 78