Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55501 TRIETHYLENE GLYCOL 150.0886 151.0965 —
P55504 242.8763 243.8834 —
P55505 278.8958 279.9028 —
P55506 Cycloaspeptide D 627.2976 628.3046 —
P55509 Insularine 2beta-N-oxide 636.2833 637.2873 —
P55518 116.9519 117.9590 —
P55519 4-Chloro-7-nitrobenzofurazan 198.9770 199.9844 —
P55520 236.8846 237.8918 —
P55521 Lupinine 169.1454 170.1523 —
P55523 Cefapime 462.1075 463.1113 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.04G110600 hypothetical protein NA 79
Glyma.04G110700 hypothetical protein AT1G72190:AT1G72190:D-isomer specific 2-hydroxyacid dehydrogenase family protein 79
Glyma.09G110000 hypothetical protein NA 79
Glyma.14G084200 hypothetical protein NA 79
Glyma.01G016500 hypothetical protein AT4G25960:ABCB2:P-glycoprotein 2 78
Glyma.03G250400 hypothetical protein AT3G04470:AT3G04470:Ankyrin repeat family protein 78
Glyma.08G110200 hypothetical protein NA 78
Glyma.15G216500 hypothetical protein NA 78
Glyma.15G220600 hypothetical protein NA 78
Glyma.15G220800 hypothetical protein NA 78