Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55049 Xylaroside B 328.1519 329.1600 —
P55052 284.2780 285.2841 —
P55053 600.7683 601.7714 —
P55057 Cephasugine 347.1721 348.1791 —
P55059 3-Methylnonanoylcarnitine 315.2432 316.2523 —
P55060 265.1400 266.1458 —
P55061 3Z,6Z,9Z-Octadecatriene 248.2467 249.2551 —
P55062 ES 242-1 604.2300 605.2419 —
P55063 Nandrolone phenpropionate 406.2498 407.2583 —
P55064 Yuccaol A 496.1147 497.1224 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.04G110600 hypothetical protein NA 79
Glyma.04G110700 hypothetical protein AT1G72190:AT1G72190:D-isomer specific 2-hydroxyacid dehydrogenase family protein 79
Glyma.09G110000 hypothetical protein NA 79
Glyma.14G084200 hypothetical protein NA 79
Glyma.01G016500 hypothetical protein AT4G25960:ABCB2:P-glycoprotein 2 78
Glyma.03G250400 hypothetical protein AT3G04470:AT3G04470:Ankyrin repeat family protein 78
Glyma.08G110200 hypothetical protein NA 78
Glyma.15G216500 hypothetical protein NA 78
Glyma.15G220600 hypothetical protein NA 78
Glyma.15G220800 hypothetical protein NA 78