Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54679 357.7333 358.7417 —
P54683 Neoacrimarine D 635.2497 636.2567 —
P54688 2,7-Dideacetyltaxuspine X 682.2954 683.3041 —
P54690 2-(Dimethylamino)acetonitrile 84.0681 85.0754 —
P54692 200.9661 201.9741 —
P54697 160.9610 161.9683 —
P54698 7-O-Acetylpseurata C 432.2164 433.2204 —
P54703 695.3327 696.3404 —
P54706 663.2964 664.3060 —
P54707 Briarlide E 636.2757 637.2796 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.04G110600 hypothetical protein NA 79
Glyma.04G110700 hypothetical protein AT1G72190:AT1G72190:D-isomer specific 2-hydroxyacid dehydrogenase family protein 79
Glyma.09G110000 hypothetical protein NA 79
Glyma.14G084200 hypothetical protein NA 79
Glyma.01G016500 hypothetical protein AT4G25960:ABCB2:P-glycoprotein 2 78
Glyma.03G250400 hypothetical protein AT3G04470:AT3G04470:Ankyrin repeat family protein 78
Glyma.08G110200 hypothetical protein NA 78
Glyma.15G216500 hypothetical protein NA 78
Glyma.15G220600 hypothetical protein NA 78
Glyma.15G220800 hypothetical protein NA 78