Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54369 Norplicacetin 503.2359 504.2432 —
P54373 Acutifolidine 371.1757 372.1852 —
P54374 Variecolorin H 353.1725 354.1821 —
P54378 Unanisoflavan 370.1780 371.1867 —
P54379 1-(3,4-Dichlorophenyl)urea 203.9836 204.9902 —
P54380 N,N-(2,2-dihydroxy-ethyl)-5Z,8Z,11Z,14Z-eicosatetraenoyl amine 391.3033 392.3095 —
P54381 473.3840 474.3911 —
P54382 240.8763 241.8835 —
P54383 Phthalic anhydride 148.0144 149.0224 —
P54384 335.1442 336.1518 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.04G110600 hypothetical protein NA 79
Glyma.04G110700 hypothetical protein AT1G72190:AT1G72190:D-isomer specific 2-hydroxyacid dehydrogenase family protein 79
Glyma.09G110000 hypothetical protein NA 79
Glyma.14G084200 hypothetical protein NA 79
Glyma.01G016500 hypothetical protein AT4G25960:ABCB2:P-glycoprotein 2 78
Glyma.03G250400 hypothetical protein AT3G04470:AT3G04470:Ankyrin repeat family protein 78
Glyma.08G110200 hypothetical protein NA 78
Glyma.15G216500 hypothetical protein NA 78
Glyma.15G220600 hypothetical protein NA 78
Glyma.15G220800 hypothetical protein NA 78