Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P09995	Daphniyunnine D	341.2004	342.2073	167
P10528	Etoperidone	377.1934	378.2001	167
P18446		1080.3689	1081.3767	167
P22504	Swietenidin B	205.0736	206.0805	167
P30111	Trifoliolasine D	783.2994	784.3081	167
P30296		1006.3388	1007.3447	167
P35381		898.3478	899.3586	167
P38138	Semapimod	744.4382	745.4471	167
P41379	11-Hydroxy-9-tridecenoic acid	228.1769	229.1859	167
P43251	Auriculatin	420.1577	421.1647	167

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.04G110600	hypothetical protein	NA	79
Glyma.04G110700	hypothetical protein	AT1G72190:AT1G72190:D-isomer specific 2-hydroxyacid dehydrogenase family protein	79
Glyma.09G110000	hypothetical protein	NA	79
Glyma.14G084200	hypothetical protein	NA	79
Glyma.01G016500	hypothetical protein	AT4G25960:ABCB2:P-glycoprotein 2	78
Glyma.03G250400	hypothetical protein	AT3G04470:AT3G04470:Ankyrin repeat family protein	78
Glyma.08G110200	hypothetical protein	NA	78
Glyma.15G216500	hypothetical protein	NA	78
Glyma.15G220600	hypothetical protein	NA	78
Glyma.15G220800	hypothetical protein	NA	78