Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P04174 Mesifurane 142.0615 143.0689 125
P07352 Benzoxazole 119.0351 120.0432 125
P14288 N-[2-(4-Prenyloxyphenyl)ethyl]tiglamide 287.1828 288.1891 125
P16266 Fibraurinoside 534.1755 535.1865 125
P19931 N-Despropyl-rotigotine 273.1184 274.1254 125
P20138 Antibiotic KA 7367B 200.1542 201.1617 125
P20173 Pinocembrin 7-O-neohesperidoside 3'''-O-acetate 606.2006 607.2079 125
P20356 Cochinchinenin 514.2035 515.2126 125
P20898 1,2-Dihydro-1,6,6-trimethylnaphthalene 172.1238 173.1309 125
P30615 384.6477 385.6534 125

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.04G110600 hypothetical protein NA 79
Glyma.04G110700 hypothetical protein AT1G72190:AT1G72190:D-isomer specific 2-hydroxyacid dehydrogenase family protein 79
Glyma.09G110000 hypothetical protein NA 79
Glyma.14G084200 hypothetical protein NA 79
Glyma.01G016500 hypothetical protein AT4G25960:ABCB2:P-glycoprotein 2 78
Glyma.03G250400 hypothetical protein AT3G04470:AT3G04470:Ankyrin repeat family protein 78
Glyma.08G110200 hypothetical protein NA 78
Glyma.15G216500 hypothetical protein NA 78
Glyma.15G220600 hypothetical protein NA 78
Glyma.15G220800 hypothetical protein NA 78