Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P24939 Seletalisib 482.0850 483.0920 153
P27043 134.0430 135.0499 153
P30381 D,L-Buthionine 191.0988 192.1064 153
P31932 Demethylwedelolactone 300.0258 301.0323 153
P41912 Ixerin N 538.2386 539.2490 153
P05370 9-(4-Hydroxyphenyl)-2-methoxy-1H-phenalen-1-one 302.0934 303.1009 152
P12550 803.2218 804.2263 152
P14195 4-Amino-2,3-xylenol 137.0836 138.0907 152
P20272 Aristoloterpenate II 527.1981 528.2063 152
P27381 Gliadins 631.2917 632.3016 152

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G165200 hypothetical protein NA 80
Glyma.06G126300 hypothetical protein NA 80
Glyma.08G182500 hypothetical protein NA 80
Glyma.14G198600 hypothetical protein NA 80
Glyma.16G057500 hypothetical protein NA 80
Glyma.01G031900 hypothetical protein AT1G23870:TPS9:trehalose-phosphatase/synthase 9 79
Glyma.02G176800 hypothetical protein AT5G06839:TGA10:bZIP transcription factor family protein 79
Glyma.04G107100 hypothetical protein AT1G22060:AT1G22060:sporulation-specific protein 79
Glyma.04G107300 hypothetical protein AT1G36310:AT1G36310:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 79
Glyma.04G107400 hypothetical protein AT2G20510:TIM44-1:translocase inner membrane subunit 44-1__AT2G36070:TIM44-2:translocase inner membrane subunit 44-2 79