Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55327 8,8''-Biskoenigine 616.2599 617.2636 —
P55329 607.7540 608.7639 —
P55341 Tetraphenylporphyrin 614.2471 615.2555 —
P55343 624.9928 625.9968 —
P55350 609.0479 610.0613 —
P55357 339.0868 340.0942 —
P55361 Aerobactin 564.2333 565.2435 —
P55362 L-gamma-Glutamyl-beta-phenyl-beta-L-alanine 294.1177 295.1250 —
P55363 331.5836 332.5907 —
P55366 Dexrazoxane 268.1177 269.1254 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G165200 hypothetical protein NA 80
Glyma.06G126300 hypothetical protein NA 80
Glyma.08G182500 hypothetical protein NA 80
Glyma.14G198600 hypothetical protein NA 80
Glyma.16G057500 hypothetical protein NA 80
Glyma.01G031900 hypothetical protein AT1G23870:TPS9:trehalose-phosphatase/synthase 9 79
Glyma.02G176800 hypothetical protein AT5G06839:TGA10:bZIP transcription factor family protein 79
Glyma.04G107100 hypothetical protein AT1G22060:AT1G22060:sporulation-specific protein 79
Glyma.04G107300 hypothetical protein AT1G36310:AT1G36310:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 79
Glyma.04G107400 hypothetical protein AT2G20510:TIM44-1:translocase inner membrane subunit 44-1__AT2G36070:TIM44-2:translocase inner membrane subunit 44-2 79