Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P07539 Quercetin 3-(6''-ethylglucuronide) 506.1114 507.1169 134
P07584 Xanthopappin A 172.0347 173.0429 134
P07886 3-Demethylsimmondsin 2'-(Z)-ferulate 537.1879 538.1922 134
P20347 Girolline 190.0621 191.0692 134
P20702 2-(Methylenebutyl)-cyclopropane 110.1086 111.1160 134
P23823 Tubastrindole G 509.2142 510.2207 134
P26981 Leandreanin B 774.2748 775.2841 134
P30845 methyl 9S,11R,15S,18-tetraacetoxy-5Z,13E-prostadienoate 552.2877 553.2929 134
P32272 8-Azaguanine 152.0460 153.0536 134
P33627 Vomifoliol 9-[glucosyl-(1->4)-xylosyl-(1->6)-glucoside] 680.2888 681.2956 134

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G098500 hypothetical protein AT2G39470:PnsL1:PsbP-like protein 2 83
Glyma.04G064500 hypothetical protein NA 82
Glyma.04G158400 hypothetical protein AT3G42660:AT3G42660:transducin family protein / WD-40 repeat family protein 82
Glyma.04G160700 hypothetical protein AT1G18610:AT1G18610:Galactose oxidase/kelch repeat superfamily protein 82
Glyma.07G095000 hypothetical protein NA 82
Glyma.20G098600 hypothetical protein AT4G01470:TIP1;3:tonoplast intrinsic protein 1;3 82
Glyma.08G108400 hypothetical protein NA 81
Glyma.13G053000 hypothetical protein AT3G02230:RGP1:reversibly glycosylated polypeptide 1 81
Glyma.18G251400 hypothetical protein NA 81
Glyma.04G191400 hypothetical protein AT3G48380:AT3G48380:Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 80