Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55395 407.3585 408.3657 —
P55396 (2E)-4-Hydroxyhexadecenoylcarnitine 413.3150 414.3221 —
P55398 Guangsangon M 610.1764 611.1829 —
P55399 5-Oxooctyl glucosinolate 445.1089 446.1162 —
P55401 Saligcinnamide 490.3950 491.4025 —
P55402 Myobontioside B 554.1645 555.1716 —
P55405 Cer(d17:1/22:6(4Z,7Z,11E,13Z,15E,19Z)-2OH(10S,17)) 627.4861 628.4955 —
P55407 Dibutylphthalic acid 278.1498 279.1577 —
P55414 Terminamine C 632.4352 633.4429 —
P55417 621.2630 622.2681 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G098500 hypothetical protein AT2G39470:PnsL1:PsbP-like protein 2 83
Glyma.04G064500 hypothetical protein NA 82
Glyma.04G158400 hypothetical protein AT3G42660:AT3G42660:transducin family protein / WD-40 repeat family protein 82
Glyma.04G160700 hypothetical protein AT1G18610:AT1G18610:Galactose oxidase/kelch repeat superfamily protein 82
Glyma.07G095000 hypothetical protein NA 82
Glyma.20G098600 hypothetical protein AT4G01470:TIP1;3:tonoplast intrinsic protein 1;3 82
Glyma.08G108400 hypothetical protein NA 81
Glyma.13G053000 hypothetical protein AT3G02230:RGP1:reversibly glycosylated polypeptide 1 81
Glyma.18G251400 hypothetical protein NA 81
Glyma.04G191400 hypothetical protein AT3G48380:AT3G48380:Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 80