Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54862 605.8809 606.8893 —
P54863 605.7784 606.7828 —
P54866 LY201116 240.1275 241.1348 —
P54869 671.1572 672.1693 —
P54870 2-Isopropylfuran 110.0722 221.1514 —
P54871 Candesartan cilexetil 610.2520 611.2601 —
P54872 Kadsurenin B 342.1516 343.1605 —
P54873 689.1570 690.1664 —
P54874 606.9143 607.9211 —
P54875 Orthosiphol L 692.2803 693.2898 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G098500 hypothetical protein AT2G39470:PnsL1:PsbP-like protein 2 83
Glyma.04G064500 hypothetical protein NA 82
Glyma.04G158400 hypothetical protein AT3G42660:AT3G42660:transducin family protein / WD-40 repeat family protein 82
Glyma.04G160700 hypothetical protein AT1G18610:AT1G18610:Galactose oxidase/kelch repeat superfamily protein 82
Glyma.07G095000 hypothetical protein NA 82
Glyma.20G098600 hypothetical protein AT4G01470:TIP1;3:tonoplast intrinsic protein 1;3 82
Glyma.08G108400 hypothetical protein NA 81
Glyma.13G053000 hypothetical protein AT3G02230:RGP1:reversibly glycosylated polypeptide 1 81
Glyma.18G251400 hypothetical protein NA 81
Glyma.04G191400 hypothetical protein AT3G48380:AT3G48380:Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 80