Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P34058 | UDP-L-threo-4-pentosulose | 374.0961 | 375.1020 | 197 |
| P47411 | 548.7589 | 549.7687 | 197 | |
| P47617 | (15Z)-15-Nitro-3,3'-dihydroxy-beta,beta-carotene-4,4'-dione | 641.3622 | 642.3738 | 197 |
| P13624 | OR-1896 | 245.1148 | 246.1225 | 196 |
| P17077 | Goodyerin | 776.2009 | 777.2050 | 196 |
| P23832 | Zanamivir | 332.1323 | 333.1393 | 196 |
| P34403 | Theaflavic acid | 428.0716 | 429.0795 | 196 |
| P42118 | 677.3706 | 678.3757 | 196 | |
| P11897 | 2-Amino-3-(3-fluoro-4,5-dihydroxyphenyl)propanoic acid | 215.0615 | 216.0681 | 195 |
| P13878 | 5-Methoxy-3,4-methylenedioxyamphetamine | 209.1074 | 210.1163 | 195 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.20G098500 | hypothetical protein | AT2G39470:PnsL1:PsbP-like protein 2 | 83 | |
| Glyma.04G064500 | hypothetical protein | NA | 82 | |
| Glyma.04G158400 | hypothetical protein | AT3G42660:AT3G42660:transducin family protein / WD-40 repeat family protein | 82 | |
| Glyma.04G160700 | hypothetical protein | AT1G18610:AT1G18610:Galactose oxidase/kelch repeat superfamily protein | 82 | |
| Glyma.07G095000 | hypothetical protein | NA | 82 | |
| Glyma.20G098600 | hypothetical protein | AT4G01470:TIP1;3:tonoplast intrinsic protein 1;3 | 82 | |
| Glyma.08G108400 | hypothetical protein | NA | 81 | |
| Glyma.13G053000 | hypothetical protein | AT3G02230:RGP1:reversibly glycosylated polypeptide 1 | 81 | |
| Glyma.18G251400 | hypothetical protein | NA | 81 | |
| Glyma.04G191400 | hypothetical protein | AT3G48380:AT3G48380:Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 | 80 |