Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P48358 ES-242-3 620.2242 621.2329 135
P48426 N-Stearoyl Aspartic acid 399.2929 400.3001 135
P51638 Dihydroisomorphine-6-glucuronide 463.1841 464.1922 135
P00007 488.7949 489.8019 134
P00391 Diethylthiophosphoric acid 170.0189 171.0268 134
P00835 Peneciraistin C 398.1573 399.1636 134
P00877 Lupinic acid 183.1238 184.1307 134
P02924 162.9316 163.9388 134
P05065 N-(35-hydroxy-pentatriacontanoyl)-sphing-4-enine 819.8070 820.8156 134
P06122 769.2075 770.2110 134

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.03G001400 hypothetical protein AT2G38610:AT2G38610:RNA-binding KH domain-containing protein 85
Glyma.14G211100 hypothetical protein AT1G65960:GAD2:glutamate decarboxylase 2 85
Glyma.18G213400 hypothetical protein NA 85
Glyma.02G081600 hypothetical protein NA 84
Glyma.06G168700 hypothetical protein AT5G63520:AT5G63520:F-box/LRR protein 83
Glyma.06G317900 hypothetical protein AT5G51400:AT5G51400:PLAC8 family protein 83
Glyma.08G211100 GLYI-9 putative lactoylglutathione lyase AT1G80160:GLYI7:Lactoylglutathione lyase / glyoxalase I family protein 83
Glyma.13G319700 hypothetical protein NA 83
Glyma.15G111200 hypothetical protein AT1G11950:AT1G11950:Transcription factor jumonji (jmjC) domain-containing protein 83
Glyma.15G219600 hypothetical protein NA 83