Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55067 6-Galloylglucose 310.1444 311.1521 —
P55071 Met-leu-phe 409.2063 410.2147 —
P55072 2-(1,3-Dimethyl-2,6-dioxo-1,2,3,6-tetrahydro-7H-purin-7-yl)-N-(4-isopropylphenyl)acetamide 355.1626 356.1697 —
P55078 WF 14865B 367.1860 368.1898 —
P55080 alpha-Carboxyethyl hydroxychroman 222.0903 223.0962 —
P55088 Methylenecyclohexane 96.0927 97.1002 —
P55095 Nicergoline 483.1218 484.1274 —
P55098 3beta-Chloro-5-androsten-17beta-ol 308.1916 309.1988 —
P55107 Rosmarinine-2-acetate 395.1936 396.2015 —
P55125 2,4-Dimethyl-1-(1-methylethyl)-benzene 148.1239 149.1311 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.03G001400 hypothetical protein AT2G38610:AT2G38610:RNA-binding KH domain-containing protein 85
Glyma.14G211100 hypothetical protein AT1G65960:GAD2:glutamate decarboxylase 2 85
Glyma.18G213400 hypothetical protein NA 85
Glyma.02G081600 hypothetical protein NA 84
Glyma.06G168700 hypothetical protein AT5G63520:AT5G63520:F-box/LRR protein 83
Glyma.06G317900 hypothetical protein AT5G51400:AT5G51400:PLAC8 family protein 83
Glyma.08G211100 GLYI-9 putative lactoylglutathione lyase AT1G80160:GLYI7:Lactoylglutathione lyase / glyoxalase I family protein 83
Glyma.13G319700 hypothetical protein NA 83
Glyma.15G111200 hypothetical protein AT1G11950:AT1G11950:Transcription factor jumonji (jmjC) domain-containing protein 83
Glyma.15G219600 hypothetical protein NA 83