Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P35928 Aloesone 7-O-glucoside 394.1231 395.1310 119
P36374 561.7929 562.7980 119
P37083 Sialyl-Le(a) oligosaccharide 1102.3780 1103.3803 119
P39162 FR 235222 556.3236 557.3294 119
P39954 852.2852 853.2931 119
P42881 Leupeptin 426.2931 427.3011 119
P43367 803.8936 804.9006 119
P43949 Serratezomine A 279.1813 280.1891 119
P44457 Montanastatin 740.4230 741.4366 119
P46832 dodecyl 2-methylpropanoate 256.2380 257.2448 119

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.03G001400 hypothetical protein AT2G38610:AT2G38610:RNA-binding KH domain-containing protein 85
Glyma.14G211100 hypothetical protein AT1G65960:GAD2:glutamate decarboxylase 2 85
Glyma.18G213400 hypothetical protein NA 85
Glyma.02G081600 hypothetical protein NA 84
Glyma.06G168700 hypothetical protein AT5G63520:AT5G63520:F-box/LRR protein 83
Glyma.06G317900 hypothetical protein AT5G51400:AT5G51400:PLAC8 family protein 83
Glyma.08G211100 GLYI-9 putative lactoylglutathione lyase AT1G80160:GLYI7:Lactoylglutathione lyase / glyoxalase I family protein 83
Glyma.13G319700 hypothetical protein NA 83
Glyma.15G111200 hypothetical protein AT1G11950:AT1G11950:Transcription factor jumonji (jmjC) domain-containing protein 83
Glyma.15G219600 hypothetical protein NA 83