Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P11441 Fura-2 641.1570 642.1631 130
P16502 Aristolindiquinone 218.0576 219.0642 130
P20755 Neo-S-petasin 334.1597 335.1664 130
P20905 787.3606 788.3693 130
P23214 Robustaflavone 7''-methyl ether 552.1063 553.1134 130
P23422 Tryptophol [xylosyl-(1->6)-glucoside] 455.1791 456.1854 130
P28058 Huperzine T 277.1650 278.1731 130
P30000 N-(1-methyl-2-hydroxy-2-phenyl-ethyl)-5Z,8Z,11Z,14Z-eicosatetraenoyl amine 437.3308 438.3417 130
P31683 105.0290 106.0365 130
P32485 Dichotosinin 478.1811 479.1865 130

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.03G001400 hypothetical protein AT2G38610:AT2G38610:RNA-binding KH domain-containing protein 85
Glyma.14G211100 hypothetical protein AT1G65960:GAD2:glutamate decarboxylase 2 85
Glyma.18G213400 hypothetical protein NA 85
Glyma.02G081600 hypothetical protein NA 84
Glyma.06G168700 hypothetical protein AT5G63520:AT5G63520:F-box/LRR protein 83
Glyma.06G317900 hypothetical protein AT5G51400:AT5G51400:PLAC8 family protein 83
Glyma.08G211100 GLYI-9 putative lactoylglutathione lyase AT1G80160:GLYI7:Lactoylglutathione lyase / glyoxalase I family protein 83
Glyma.13G319700 hypothetical protein NA 83
Glyma.15G111200 hypothetical protein AT1G11950:AT1G11950:Transcription factor jumonji (jmjC) domain-containing protein 83
Glyma.15G219600 hypothetical protein NA 83