Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P09995 Daphniyunnine D 341.2004 342.2073 167
P10528 Etoperidone 377.1934 378.2001 167
P18446 1080.3689 1081.3767 167
P22504 Swietenidin B 205.0736 206.0805 167
P30111 Trifoliolasine D 783.2994 784.3081 167
P30296 1006.3388 1007.3447 167
P35381 898.3478 899.3586 167
P38138 Semapimod 744.4382 745.4471 167
P41379 11-Hydroxy-9-tridecenoic acid 228.1769 229.1859 167
P43251 Auriculatin 420.1577 421.1647 167

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.02G125700 hypothetical protein NA 87
Glyma.09G133800 hypothetical protein NA 87
Glyma.13G049400 hypothetical protein AT2G20000:HBT:CDC27 family protein 87
Glyma.13G050500 hypothetical protein NA 87
Glyma.14G211000 IDH1 AT1G65930:cICDH:cytosolic NADP+-dependent isocitrate dehydrogenase 87
Glyma.16G024600 hypothetical protein AT1G01320:AT1G01320:Tetratricopeptide repeat (TPR)-like superfamily protein 87
Glyma.16G178700 hypothetical protein AT5G52660:AT5G52660:Homeodomain-like superfamily protein 87
Glyma.16G200400 hypothetical protein NA 87
Glyma.03G036600 hypothetical protein NA 86
Glyma.16G207700 hypothetical protein AT4G15093:LigB:catalytic LigB subunit of aromatic ring-opening dioxygenase family 86