Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P35545 616.8018 617.8091 123
P36889 Cyanazine 240.0879 241.0955 123
P37209 2,3-di-O-hexanoyl-alpha-glucopyranose 376.2115 377.2181 123
P37987 1,5-Dihydro-7-(1-piperidinyl)-imidazo(2,1-b)quinazolin-2(3H)-one 270.1463 811.4444 123
P41869 Scutebarbatine H 469.2026 470.2090 123
P43011 1080.0249 1081.0336 123
P43202 3R-undecanoyloxy-2R-hydroxy-4-methylpentanoic acid methyl ester 330.2375 331.2444 123
P46986 Butyl oleate sulfate 434.2692 435.2782 123
P48228 Valerylfentanyl 364.2459 365.2510 123
P03650 4-Sinapoylquinic acid 398.1211 399.1261 122

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.02G125700 hypothetical protein NA 87
Glyma.09G133800 hypothetical protein NA 87
Glyma.13G049400 hypothetical protein AT2G20000:HBT:CDC27 family protein 87
Glyma.13G050500 hypothetical protein NA 87
Glyma.14G211000 IDH1 AT1G65930:cICDH:cytosolic NADP+-dependent isocitrate dehydrogenase 87
Glyma.16G024600 hypothetical protein AT1G01320:AT1G01320:Tetratricopeptide repeat (TPR)-like superfamily protein 87
Glyma.16G178700 hypothetical protein AT5G52660:AT5G52660:Homeodomain-like superfamily protein 87
Glyma.16G200400 hypothetical protein NA 87
Glyma.03G036600 hypothetical protein NA 86
Glyma.16G207700 hypothetical protein AT4G15093:LigB:catalytic LigB subunit of aromatic ring-opening dioxygenase family 86