Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55199 Neoechinulin 391.1908 392.1990 —
P55200 Oxybuprocaine 308.2048 617.4153 —
P55202 Triptregeline B 653.2490 654.2596 —
P55204 Monascorubramine 381.1973 382.2060 —
P55205 PA(20:4(5Z,8Z,11Z,14Z)/14:1(9Z)) 666.4297 667.4397 —
P55208 Menaquinol 310.1940 311.2013 —
P55211 391.3353 392.3429 —
P55212 (5Z,9Z)-2-methoxy-5,9-hexacosadienoic acid 422.3731 423.3810 —
P55213 Indocarbazostatin D 512.1345 513.1415 —
P55216 160.9605 161.9681 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G200600 hypothetical protein AT5G51830:AT5G51830:pfkB-like carbohydrate kinase family protein 89
Glyma.20G218500 hypothetical protein AT4G10465:AT4G10465:Heavy metal transport/detoxification superfamily protein__AT2G18196:AT2G18196:Heavy metal transport/detoxification superfamily protein 89
Glyma.03G002100 hypothetical protein AT5G01930:MAN6:Glycosyl hydrolase superfamily protein 88
Glyma.03G002400 hypothetical protein AT5G25780:EIF3B-2:eukaryotic translation initiation factor 3B-2 88
Glyma.03G034200 hypothetical protein NA 88
Glyma.06G305100 hypothetical protein NA 88
Glyma.07G080900 hypothetical protein NA 88
Glyma.16G179100 BCH2 beta-carotene hydroxylase BCH2 AT4G25700:BETA-OHASE 1:beta-hydroxylase 1__AT5G52570:BETA-OHASE 2:beta-carotene hydroxylase 2 88
Glyma.18G213300 hypothetical protein AT5G43180:AT5G43180:transmembrane protein, putative (Protein of unknown function, DUF599) 88
Glyma.02G081900 hypothetical protein AT1G43650:UMAMIT22:nodulin MtN21 /EamA-like transporter family protein 87