Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P54539 | Sophoraflavanone J | 650.2518 | 651.2584 | — |
| P54548 | (R)-6-(3-Methylpiperazin-1-yl)nicotinonitrile | 202.1257 | 203.1332 | — |
| P54552 | 119.0802 | 120.0872 | — | |
| P54557 | Styrene | 104.0616 | 105.0687 | — |
| P54565 | 257.2589 | 258.2663 | — | |
| P54569 | 128.9610 | 129.9684 | — | |
| P54571 | 1-(9Z-nonadecenoyl)-glycero-3-phosphate | 450.2730 | 451.2794 | — |
| P54575 | 109.0076 | 110.0149 | — | |
| P54581 | 360.8103 | 361.8184 | — | |
| P54587 | 3-Methoxy-19-norpregna-1,3,5(10)-trien-20-one | 312.2077 | 313.2144 | — |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.17G004500 | hypothetical protein | AT5G47800:AT5G47800:Phototropic-responsive NPH3 family protein | 91 | |
| Glyma.03G068700 | hypothetical protein | AT5G41970:AT5G41970:Metal-dependent protein hydrolase | 90 | |
| Glyma.03G070300 | hypothetical protein | NA | 90 | |
| Glyma.07G078000 | hypothetical protein | NA | 90 | |
| Glyma.13G136500 | hypothetical protein | NA | 90 | |
| Glyma.03G068600 | hypothetical protein | NA | 89 | |
| Glyma.07G067600 | hypothetical protein | NA | 89 | |
| Glyma.14G207700 | hypothetical protein | AT5G17380:AT5G17380:Thiamine pyrophosphate dependent pyruvate decarboxylase family protein | 89 | |
| Glyma.14G208400 | hypothetical protein | AT5G16360:AT5G16360:NC domain-containing protein-like protein | 89 | |
| Glyma.16G143700 | hypothetical protein | AT3G50830:COR413-PM2:cold-regulated 413-plasma membrane 2 | 89 |