Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54455 789.0907 790.0952 —
P54456 Darexaban glucuronide 650.2594 651.2677 —
P54462 617.4159 618.4227 —
P54463 316.8012 317.8087 —
P54465 Pentenylbenzene 146.1082 147.1157 —
P54466 (-)-4,6'-Anhydrooxysporidinone 471.3016 472.3077 —
P54467 201.1586 202.1666 —
P54468 31-Hydroxy rifabutin 862.4276 432.2210 —
P54470 Alogliptin 339.1719 340.1772 —
P54473 Tiegusanin E 650.2722 651.2779 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.17G004500 hypothetical protein AT5G47800:AT5G47800:Phototropic-responsive NPH3 family protein 91
Glyma.03G068700 hypothetical protein AT5G41970:AT5G41970:Metal-dependent protein hydrolase 90
Glyma.03G070300 hypothetical protein NA 90
Glyma.07G078000 hypothetical protein NA 90
Glyma.13G136500 hypothetical protein NA 90
Glyma.03G068600 hypothetical protein NA 89
Glyma.07G067600 hypothetical protein NA 89
Glyma.14G207700 hypothetical protein AT5G17380:AT5G17380:Thiamine pyrophosphate dependent pyruvate decarboxylase family protein 89
Glyma.14G208400 hypothetical protein AT5G16360:AT5G16360:NC domain-containing protein-like protein 89
Glyma.16G143700 hypothetical protein AT3G50830:COR413-PM2:cold-regulated 413-plasma membrane 2 89