Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P15527 (1S,4R)-passicapsin 417.1645 418.1754 214
P17647 Quercetin 3-sambubioside-7-glucoside 758.1981 759.2019 214
P04012 N2,N5-Diacetylornithine 216.1093 217.1155 213
P14817 Delphinidin 3-(6-malonylglucoside)-5-glucoside 712.1486 713.1566 212
P48613 Emorfazone 239.1270 240.1348 212
P06958 Adafosbuvir 545.1626 546.1675 211
P12657 4,4'-Stilbenedicarboxamidine dihydrochloride 264.1403 265.1498 211
P22693 Propanoic acid, 3-((((2-(1,1-dimethylethyl)-5-methoxy-6-benzothiazolyl)amino)thioxomethyl)thio)- 384.0657 385.0746 211
P34892 Aristolin 629.2974 630.3072 211
P37540 PA(19:2(10Z,13Z)/20:4(5Z,8Z,11Z,13E)+=O(15)) 748.4711 749.4768 211

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.17G004500 hypothetical protein AT5G47800:AT5G47800:Phototropic-responsive NPH3 family protein 91
Glyma.03G068700 hypothetical protein AT5G41970:AT5G41970:Metal-dependent protein hydrolase 90
Glyma.03G070300 hypothetical protein NA 90
Glyma.07G078000 hypothetical protein NA 90
Glyma.13G136500 hypothetical protein NA 90
Glyma.03G068600 hypothetical protein NA 89
Glyma.07G067600 hypothetical protein NA 89
Glyma.14G207700 hypothetical protein AT5G17380:AT5G17380:Thiamine pyrophosphate dependent pyruvate decarboxylase family protein 89
Glyma.14G208400 hypothetical protein AT5G16360:AT5G16360:NC domain-containing protein-like protein 89
Glyma.16G143700 hypothetical protein AT3G50830:COR413-PM2:cold-regulated 413-plasma membrane 2 89