Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P08612 Scrophuloside A7 752.2562 753.2657 161
P13827 (3-Nitrobenzoyl)alanine 238.0564 239.0640 161
P16053 Luteolin 7-galacturonide-4'-glucoside 624.1286 625.1388 161
P21570 (6E)-8-Oxogeraniol 168.1140 169.1209 161
P26728 1-nonen-3-one 140.1196 141.1267 161
P30204 Theasaponin C1 1174.5741 1175.5812 161
P36301 Dactylamide A 448.2163 449.2208 161
P46130 AMD 070 349.2298 350.2359 161
P50455 Carrageenan, potassium salt of 347.2545 348.2597 161
P11076 Amino leucine 146.1063 147.1143 160

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1,722
Glyma.16G119300 hypothetical protein NA 1,709
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1,682
Glyma.11G049700 hypothetical protein NA 1,671
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1,671
Glyma.16G121500 hypothetical protein NA 1,619
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1,615
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1,615
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1,614
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1,614