Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P06364 785.2020 786.2053 104
P09170 Daphnoline 580.2617 581.2695 104
P12572 Thiomarinol B 672.2387 673.2441 104
P13879 Furametpyr 333.1246 334.1317 104
P14685 229.5656 230.5721 104
P16570 N-[(1S)-1-(Ethoxycarbonyl)-3-phenylpropyl]-L-alanyl-L-proline 3-nitrooxypropyl ester 479.2301 480.2398 104
P18196 105.0291 106.0370 104
P22412 2-[4-(3-Hydroxypropyl)-2-methoxyphenoxy]-1,3-propanediol 256.1299 257.1368 104
P23185 (E)-3,7-Dimethyl-2,6-octadienyl nonanoate 294.2531 295.2600 104
P23839 Pelargonidin 3-O-[2-O-beta-D-glucopyranosyl-6-O-(E)-p-coumaroyl-beta-D-glucopyranoside]-5-O-(beta-D-glucopyranoside) 902.2475 903.2557 104

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1,722
Glyma.16G119300 hypothetical protein NA 1,709
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1,682
Glyma.11G049700 hypothetical protein NA 1,671
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1,671
Glyma.16G121500 hypothetical protein NA 1,619
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1,615
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1,615
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1,614
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1,614