Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P40427 Anzuroside 640.3421 641.3485 112
P41440 Thuja-2,4[10]-diene 134.1087 135.1156 112
P43015 Robustaflavone 7''-methyl ether 552.1039 553.1093 112
P46641 1-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-2-tetradecanoyl-glycero-3-phospho-(1'-myo-inositol) 830.4901 831.4964 112
P47211 [4-((1Z)-2-(Acetylamino)-3-{[1-(1,1'-biphenyl-4-ylmethyl)-2-oxoazepan-3-YL]amino}-3-oxoprop-1-enyl)-2-formylphenyl]acetic acid 567.2412 568.2503 112
P48131 Herbarumin II 244.1302 245.1383 112
P49348 Tirandamycin C 387.2085 388.2183 112
P50908 670.3678 671.3788 112
P50943 Chilocorine A 390.2704 391.2767 112
P04365 Monascorubramine 381.1953 382.2017 111

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1,722
Glyma.16G119300 hypothetical protein NA 1,709
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1,682
Glyma.11G049700 hypothetical protein NA 1,671
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1,671
Glyma.16G121500 hypothetical protein NA 1,619
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1,615
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1,615
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1,614
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1,614