Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P34102 | 4,4,6,6-Tetramethyl-bicyclo[3.1.0]hex-2-ene | 136.1242 | 273.2557 | 131 |
| P34777 | 311.2896 | 312.2966 | 131 | |
| P36124 | Lusitanicoside | 442.1820 | 443.1889 | 131 |
| P38167 | 470.7163 | 471.7226 | 131 | |
| P45059 | 1-hexadecanoyl-2-succinyl-sn-glycero-3-phospho-(1'-sn-glycerol) | 584.2964 | 585.3055 | 131 |
| P46718 | 276.6279 | 277.6353 | 131 | |
| P53547 | PA(i-12:0/5-iso PGF2VI) | 662.3876 | 663.3948 | 131 |
| P55453 | Mangiferin 6'-gallate | 574.0981 | 575.1037 | 131 |
| P08500 | Carpachromene dimethyl ether | 364.1312 | 365.1390 | 130 |
| P09738 | Gelsemicine | 358.1880 | 359.1951 | 130 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.07G021800 | hypothetical protein | AT1G80920:J8:Chaperone DnaJ-domain superfamily protein | 1,722 | |
| Glyma.16G119300 | hypothetical protein | NA | 1,709 | |
| Glyma.04G084200 | hypothetical protein | AT2G25830:AT2G25830:YebC-like protein | 1,682 | |
| Glyma.11G049700 | hypothetical protein | NA | 1,671 | |
| Glyma.19G011700 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 1,671 | |
| Glyma.16G121500 | hypothetical protein | NA | 1,619 | |
| Glyma.02G086900 | hypothetical protein | AT3G24130:AT3G24130:Pectin lyase-like superfamily protein | 1,615 | |
| Glyma.11G127300 | hypothetical protein | AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein | 1,615 | |
| Glyma.11G127100 | hypothetical protein | AT1G06040:STO:B-box zinc finger family protein | 1,614 | |
| Glyma.11G127200 | hypothetical protein | AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein | 1,614 |