Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P54104 | 3-Deoxyestrone | 254.1632 | 255.1704 | — |
| P54106 | 432.7419 | 433.7480 | — | |
| P54111 | 9R-hydroxy-2E,4E-decadienoic acid | 184.1093 | 185.1159 | — |
| P54112 | 352.8207 | 353.8284 | — | |
| P54114 | 180.9669 | 181.9745 | — | |
| P54116 | 356.8340 | 357.8414 | — | |
| P54117 | Chlovalicin | 332.1393 | 333.1472 | — |
| P54119 | Litsenolide C1 | 310.2467 | 311.2532 | — |
| P54121 | 6-O-Glc-paromamine | 485.2244 | 486.2324 | — |
| P54125 | Agrimol F | 640.2606 | 641.2687 | — |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 7,578 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 6,363 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 6,345 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 4,562 | |
| Glyma.14G093100 | hypothetical protein | NA | 4,504 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 4,469 | |
| Glyma.19G012300 | hypothetical protein | NA | 4,469 | |
| Glyma.09G082000 | hypothetical protein | NA | 4,386 | |
| Glyma.13G135700 | hypothetical protein | NA | 4,376 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 4,376 |