Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54084 2,2',3,3',6,6'-Hexachlorobiphenyl-5-ol 373.8419 374.8486 —
P54086 DG(8:0/0:0/20:3(8Z,11Z,14Z)-2OH(5,6)) 538.3839 539.3928 —
P54088 Vernopectolide A 406.1610 407.1706 —
P54097 Sulfisomidine 278.0831 279.0905 —
P54098 2-Tetradecylcyclobutanone 266.2582 267.2656 —
P54099 Diethylene glycol 106.0620 107.0690 —
P54100 526.8727 527.8780 —
P54101 ethyl 11Z-hexadecenoate 282.2539 283.2616 —
P54102 TRIETHYLENE GLYCOL 150.0885 151.0955 —
P54103 357.8254 358.8334 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 7,578
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 6,363
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 6,345
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 4,562
Glyma.14G093100 hypothetical protein NA 4,504
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 4,469
Glyma.19G012300 hypothetical protein NA 4,469
Glyma.09G082000 hypothetical protein NA 4,386
Glyma.13G135700 hypothetical protein NA 4,376
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 4,376