Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P24140 Aristolindiquinone 218.0573 219.0638 183
P29594 Butanoic acid, 3-((2-naphthalenylsulfonyl)amino)-4-oxo-4-((2-phenylethyl)amino)-, (S)- 426.1242 427.1313 183
P36026 O-Phosphoviomycin 765.2885 766.2977 183
P37799 4-pregnene-17alpha,20beta,21-triol-3,11-dione 362.2054 363.2127 183
P38116 Leuphasyl 569.2841 570.2907 183
P39693 4-[2-Acetylamino-2-(1-biphenyl-4-ylmethyl-2-oxo-azepan-3-ylcarbamoyl)-ethyl]-2-formyl-benzoic acid 555.2408 556.2481 183
P44241 Avermectin A2a monosaccharide 760.4380 761.4431 183
P46117 (S)-3-(6-Methoxypyridin-3-yl)-3-(2-oxo-3-(3-(5,6,7,8-tetrahydro-1,8-naphthyridin-2-yl)propyl)imidazolidin-1-yl)propanoic acid 439.2225 440.2339 183
P46875 2-Ethylhexyl 4-(dimethylamino)benzoate 277.2077 278.2165 183
P00749 4(3H)-Quinazolinone, 2-ethyl-3-(o-tolyl)- 264.1257 265.1335 182

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 7,578
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 6,363
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 6,345
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 4,562
Glyma.14G093100 hypothetical protein NA 4,504
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 4,469
Glyma.19G012300 hypothetical protein NA 4,469
Glyma.09G082000 hypothetical protein NA 4,386
Glyma.13G135700 hypothetical protein NA 4,376
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 4,376