Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P21913 Eremosulphoxinolide A 464.1861 465.1930 100
P21951 3-O-Isobutyrylkinamycin C 566.1508 567.1587 100
P22523 Taxifolin 3-galactosyl-(1->6)-glucoside 628.1763 629.1823 100
P23684 823.2915 824.2927 100
P23825 Mitrasulgynine 476.1644 477.1746 100
P23903 502.0150 503.0232 100
P25757 1-(4Z,7Z,10Z,13Z,16Z,19Z-docosahexaenoyl)-glycero-3-phosphoserine 569.2739 570.2799 100
P27974 Dubioside A 1102.5320 1103.5298 100
P28862 Perrottetin F 442.1789 443.1878 100
P29847 Met-enkephalin-Arg-Phe 876.3955 877.4006 100

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 7,578
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 6,363
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 6,345
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 4,562
Glyma.14G093100 hypothetical protein NA 4,504
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 4,469
Glyma.19G012300 hypothetical protein NA 4,469
Glyma.09G082000 hypothetical protein NA 4,386
Glyma.13G135700 hypothetical protein NA 4,376
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 4,376