Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P45656 Aglain B 630.2840 631.2925 117
P45744 366.6513 367.6565 117
P53375 N(6)-Monobutyryladenosine 337.1396 338.1472 117
P53643 662.1493 663.1566 117
P54509 n2-Acetyl,n6-methyllysine 202.1324 203.1390 117
P04587 Methionyl-Glutamate 278.0937 279.1010 116
P13464 Tripterygiumine T 693.2310 694.2329 116
P17580 Swietenidin B 205.0721 206.0796 116
P22655 Candoxatrilat 399.2293 400.2366 116
P25819 Thonzylamine 286.1743 287.1822 116

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 7,578
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 6,363
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 6,345
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 4,562
Glyma.14G093100 hypothetical protein NA 4,504
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 4,469
Glyma.19G012300 hypothetical protein NA 4,469
Glyma.09G082000 hypothetical protein NA 4,386
Glyma.13G135700 hypothetical protein NA 4,376
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 4,376